The work at UC Davis

 

30. “Pumpkin eIF5A isoforms interact with components of the translational machinery in the cucurbit sieve tube system”, Yi Ma, Eriko Miura, Byung-Kook Ham, Hao-Wen Cheng, Young-Jin Lee, William J. Lucas*, accepted in Plant J. on Aug 28th, 2010.

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29. “Analysis of the Pumpkin Phloem Proteome Provides Functional Insights into Angiosperm Sieve Tube Function”, Ming-Kuem Lin+, Young-Jin Lee+, Tony J. Lough, Brett S. Phinney, and William J. Lucas*, Mol. Cell. Proteomics, 2009, 8, 343-356 (+ equal contribution).

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28. “Distinguishing Mouse Strains by Proteomic Analysis of Pelage Hair”, Robert H. Rice*, David M. Rocke, Hua-Sheng Tsai, Kathleen A. Silva, Young Jin Lee, John P. Sundberg, J. Invest. Dermatology, (Published on line, Mar 19, 2009); doi: 10.1038/jid.2009.52.

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27. “Founder mutations in the lipase H (LIPH) gene in families with autosomal recessive woolly hair/hypotrichosis”. Yutaka Shimomura, Muhammad Wajid, Abraham Zlotogorski, Amelia Mohabir, Young Jin Lee, Robert H. Rice, and Angela M. Christiano*, J. Invest. Dermatology (Published on line, Mar 5, 2009); doi: 10.1038/jid.2009.19.

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26. “Human Proteinpedia enables sharing of human protein data”, S Mathivanan et al., Nature Biotechnol., 2008, 26 (2), 164-167.

25. “Mass Spectrometry based Cross-linking Sites Mapping for Structural Elucidation of Protein and Protein Complex”, Young Jin Lee, Molecular Biosystems, 2008, 4, 816 (invited review).

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24. “Shotgun Cross-linking Analysis for Studying Quaternary and Tertiary Protein Structures”, Young Jin Lee*, Laura L. Lachner, Jodi M. Nunnari, Brett S. Phinney, J. Proteome Res., 2007, 6 (10), 3908 -3917. (first and corresponding author)

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23. “FLOWERING LOCUS T Protein May Act as the Long-Distance Florigenic Signal in the Cucurbits”, Ming-Kuelm Lin, Helene Belanger, Erika Varkonyi-Gasic, Young-Jin Lee, Erico Miura, Karla Gendler, Richard A. Jorgensen, Brett Phinney, Tony J. Lough and William J. Lucas*, Plant Cell, 2007, 19, 1488-1506.

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22. “The citrus fruit proteome: insights into citrus fruit metabolism”, E. Katz, M. Fon, Y.J. Lee, B.S. Phinney, A. Sadka, E. Blumwald*, Planta, 2007, 226, 989-1005.

21. “Extracellular glycosylphosphatidylinositol-anchored mannoproteins and proteases of Cryptococcus neoformans”, Richard A. Eigenheer, Young Jin Lee, Eduardo Blumwald, Brett S. Phinney, Angie Gelli*, FEMS Yeast Research, 2007, 7, 499.

 

20. "P166-S Novel Method for High-Throughput Cross-Linking Sites Analysis", Y Lee, BS Phinney, JM Nunari, LL Lackner, J. Biomol. Tech. 18 (1), 57-58, 2007.

 

19. “A Distinctive Repertoire of Contingency Genes Conferring Mutation-based Phase Variation and Combinatorial Expression of Surface Lipoproteins in Mycoplasma capricolum subsp. capricolum of the Mycoplasma mycoides Phylogenetic Cluster”, Kim S. Wise*, Mark F. Foecking, Kerstin Röske, Young Jin Lee, Young Moo Lee, Anup Madan, and Michael J. Calcutt, J. Bacteriology, 2006, 188, 4926-4941.

 

18. “Proteome Analysis of Human Hair by Two Dimensional Liquid Chromatography Coupled with Tandem Mass Spectrometry (2-D LC-MS/MS): From Protein Identification to Posttranslational Modification”, Young Jin Lee, Robert H. Rice*, and Young Moo Lee, Mol. Cell. Proteomics, 2006, 5, 789-800.

 

17. “Core of the Partner Switching Signaling Mechanism is Conserved in the Obligate Intracelluar Pathogen Chlamydia trachomatis”, Lei Hua, P. Scott Hefty, Young Jin Lee, Young Moo Lee, Richard S. Stephens, and Chester W. Price*, Molecular Microbiology, 2006, 59, 623.

 

16. “Identification of proteins adducted by reactive metabolites of naphthalene and 1- nitronaphthalene in dissected airways of rhesus macaques”, Ching Yu Lin, Bridget C. Boland, Young Jin Lee, Michelle R. Salemi, Dexter Morin, Lisa A. Miller, Charles G. Plopper, Alan R. Buckpitt*, Proteomics, 2006, 6, 972.

 

15. “c1 Fragment Ions in Collision-induced Dissociation of Glutamine Containing Peptide Ions: A Tip for De Novo Sequencing” Young Jin Lee and Young Moo Lee*, Rapid Commun. Mass Spectrom. 2004; 18, 2069-2076.

 

The work at Indiana University

 

14. “Development of Field Modulation in a Split-Field Drift Tube for High-Throughput Multi-dimensional Separations” S. L. Koeniger, S. J. Valentine, S. Myung, Y. J. Lee, D. E. Clemmer*, J. Proteome Research. 2005, 4, 25-35.

 

13. “Development of High-Sensitivity Ion Trap-IMS-TOF Techniques: A High-Throughput Nano-LC/IMS/TOF Separation of the Drosophila Fly Proteome”, S. Myung, Y. J. Lee, M. H. Moon, J. A. Taraszka, R. Sowell, S. Koeniger, A.E. Hilderbrand, S.J. Valentine, L. Cherbas, T. C. Kaufmann, D. F. Miller, Y. Mechref, M. V. Novotny, M. Ewing, D. E. Clemmer*, Anal. Chem. 2003, 75, 5137-5145.

 

12. “Development of high-throughput LC-injected ion mobility-Q-TOF techniques for analysis of complex peptide mixtures”, Y. J. Lee, C. S. Hoaglund-Hyzer, C.A.S. Barnes, A. E. Hilderbrand, S. J. Valentine, D. E. Clemmer*, J. Chromatography B 2002, 782, 343-351 (invited to the special issue for proteomics).

 

11. “Structural transitions of electrosprayed ubiquitin ions stored in an ion trap over ~10ms to 30s”, S. Myung, E. R. Badman, Y. J. Lee, D.E. Clemmer*, J. Phys. Chem. A 2002, 106, 9976-9982.

 

10. “Coupling Ion Mobility Separations, Collisional Activation Techniques, and Multiple Stages of MS for Analysis of Complex Peptide Mixtures”, C. S. Hoaglund-Hyzer, Y. J. Lee, A. E. Counterman, D. E. Clemmer*, Anal. Chemistry, 2002, 74, 992-1006.

 

9. “Collision-Induced Dissociation of Mobility-Separated Ions using an Orifice-Skimmer Cone at the Back of a Drift Tube”, Y. J. Lee, C. S. Hoaglund-Hyzer, J. A. Taraszka, G. A. Zientara, A. E. Counterman, D. E. Clemmer*, Anal. Chemistry, 2001, 73, 3549-3555.

 

 

The work at Hyundai Electronics

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8. “Correction of SIMS depth profile distorted by oxygen flooding”, Y. J. Lee*, C. S. Jung, M.-N. Yoon, S.-Y. Lee, J. Korean Vacuum Soc., 2001, 10, 225-233.

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The work at Seoul National University

 

7. “Collision-induced dissociation of cesium iodide cluster ions. Scattering angular distribution and excitation mechanism”, Y. J. Lee and M. S. Kim*, J. Phys. Chem. A 1997, 101, 6148-6157.

6. “Elimination of the multiple collision effect from a mass-analyzed ion kinetic energy profile in collision-induced dissociation of high mass ions”, Y. J. Lee and M. S. Kim*, Int. J. Mass Spectrom. Ion Processes 1997, 171, 31-38.

5. “Scattering angular distributions in collisionally activated dissociation of some high mass ions; Analysis of mass-analyzed ion kinetic energy peak shapes”, Y. J. Lee and M. S. Kim*, J. Chem. Phys. 1995, 103, 5442-5450.

4. “Analysis of mass-analyzed ion kinetic energy peak profiles. III. Analytical expression for a peak shape generated by collisionally activated dissociation”, Y. J. Lee, H. Y. So, and M. S. Kim*, Rapid Commun. Mass Spectrom. 1994, 8, 571-577.

3. “C-F bond cleavage in collisionally activated dissociation of polyfluorinated molecular ions: Empirical structure-upward-shift correlation”, Y. J. Lee and M. S. Kim*, Rapid Commun. Mass Spectrom. 1993, 7, 994-998.

2. “Anisotropic C-F bond cleavage in collisionally activated dissociation of a hexafluorobenzene molecular ion beam”, Y. J. Lee and M. S. Kim*, J. Phys. Chem. 1993, 97, 1119-1124.

1. “Anomalous translational energy upshift in collisionally activated dissociation of hexafluorobenzene molecular ion”, Y. J. Lee and M. S. Kim*, Chem. Phys. Lett. 1992, 192, 89-93; Erratum in Chem. Phys. Lett. 1992, 195, 286.